Microarray Studies - Assessing Statistical Significance

Doctor Anil Malhotra discusses the problem of deciding what meets the criteria for statistical significance for microarray studies.

I think it is fair to say that different research groups have different ideas and theories about how to achieve or what meets the criteria for statistical significance. Many groups apply a very simple correction called the Bonferroni correction, which is somewhat conservative and leads to a p-value which is being required on the order of 10-7 or 10-8 for a whole genome association study. Other groups have taken the approach of simply examining the best 20, 50, or 100 results in any individual data set and then comparing those to another data set perhaps across the top 20, 50, or 100 and looking for commonalities between these kinds of studies.

microarray, statistical, significance, Bonferroni, correction, methodology, research, Anil, Malhotra

Related Content

2311. Microarray Studies - Danger of False Positives

Doctor Anil Malhotra discusses that because whole genome microarray studies examine so much genetic data, the daners of false-positive results are very real.

  • ID: 2311
  • Source: G2C

2309. Genotyping with Microarray Technologies

Doctor Anil Malhotra discusses new technologies that allow scientists to genotype large numbers of genetic polymorphisms.

  • ID: 2309
  • Source: G2C

2300. Studies of Genes in Bipolar Disorder and Schizophrenia

Doctor Anil Malhotra discusses the search for genes in both bipolar disorder and schizophrenia, both of which are in their infancy.

  • ID: 2300
  • Source: G2C

2301. Endophenotype Approach to Schizophrenia Research

Doctor Anil Malhotra discusses endophenotype strategies for studying schizophrenia, which can examine neurocognitive function or brain-imaging.

  • ID: 2301
  • Source: G2C

2299. Transcription Factors Can Turn Genes On and Off

Doctor Anil Malhotra discusses how transcription factors can turn genes on or off, possibly leading to increased or reduced risk of illness.

  • ID: 2299
  • Source: DNALC.G2C

2317. Schizophrenia - Do Genes Correspond to Symptoms?

Doctor Anil Malhotra discusses emerging research relating specific genes to positive (DISC1) and negative (e.g. dysbindin) symptoms of schizophrenia.

  • ID: 2317
  • Source: G2C

2318. Symptoms of Schizophrenia are Mixed

Doctor Anil Malhotra the positive and negative symptoms of schizophrenia - individuals with the disorder typically have a mix of both sets of symptoms.

  • ID: 2318
  • Source: G2C

2313. Linkage versus Association Studies

Doctor Anil Malhotra compares (older) linkage and (more modern) association techniques for identifying candidate genes for disorders.

  • ID: 2313
  • Source: G2C

2314. Treating Schizophrenia with Antipsychotic Medication

Doctor Anil Malhotra discusses antipsychotic treatments for schizophrenia, where medication regularly throughout lifetime is often recommended.

  • ID: 2314
  • Source: G2C

2315. Antipsychotic Medications - First versus Second Generation

Doctor Anil Malhotra compares the effectiveness of of second generation antipsychotic medications, such as Clozapine, with earlier medications.

  • ID: 2315
  • Source: G2C